PSA: Protein Sequence Analyzer
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Dr Bipab Ghosh
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Logashree
Input Form
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Your data type
Ensemble of protein sequences in FASTA format
Multiple sequence alignment (MSA) data in FASTA format
Input type
Upload file
Paste a sequence
Upload the protein sequence
Additional calculations
(Optional)
Hydrophobic profile of all sequences
Protein parameters in "ProtParam" style
Mutual Information for co-evolution analysis
Additional options for "MSA"
(Optional)
Reweight frequency counts
?
Similarity Threshold
?
Pseudo Count
?
Sequence filtering
(Optional)
Only Filter
Select
sequences with a keyword in the header
Reject
sequences with a keyword in the header
Reject sequences with an ambiguous character
Number of ambiguous characters allowed
Select sequences with minimum length
Select sequences with maximum length
Email Notification
(Optional)
Email address
Load Sample Data
Ensemble of protein sequences
Multiple sequence alignment
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